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耳蜗衰老的时间分辨单核图谱揭示双相炎性衰老及Tbx2依赖的内毛细胞维持

A time-resolved single-nucleus atlas of cochlear aging reveals biphasic inflammaging and Tbx2-dependent inner hair cell maintenance.

基础研究耳科IF 3.2Q1

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中文摘要

背景: 年龄相关性听力损失(ARHL)是老年人中最常见的感觉缺陷,但其分子进展仍不清楚。很少有耳蜗单细胞研究将细胞间通讯、基因调控网络(GRN)重建和跨队列bulk验证整合到一个时间框架中。
方法: 我们重新分析了C57BL/6 J小鼠耳蜗在3、12和24月龄时公开可用的单核RNA测序数据,并与两个独立的bulk微阵列队列进行交叉验证。推断配体-受体相互作用,并在配体表达水平上进行验证。重建GRN并进行计算机模拟扰动;特征选择提取了跨尺度炎症特征。
结果: ARHL并不遵循线性下降。全耳蜗I型干扰素反应在12月龄达到峰值,并在24月龄消退。载脂蛋白E在螺旋神经节神经元、内毛细胞(IHC)、巨噬细胞和纤维细胞中遵循三阶段轨迹:基线、代偿性上调、崩溃。SLIT-ROBO轴突导向信号在这些细胞中关闭,同时伴随神经营养和Notch信号撤退。计算机模拟扰动确定T-box转录因子2(Tbx2)为保护性GRN节点:敲除使81.2%的IHC向衰老方向驱动,过表达使74.6%向年轻方向驱动。一个13基因炎症面板显示巨噬细胞中年激活和终末期耗竭,与干扰素峰值相呼应。
结论: 这些发现支持两阶段ARHL模型,即中年免疫激活随后终末期突触、脂质和轴突导向崩溃,将中年窗口和Tbx2依赖的IHC维持定位为候选干预靶点,尚待体内验证。

英文摘要

BACKGROUND: Age-related hearing loss (ARHL) is the most prevalent sensory deficit in older adults, yet its molecular progression remains poorly resolved. Few cochlear single-cell studies have integrated cell-cell communication, gene regulatory network (GRN) reconstruction, and cross-cohort bulk validation into one temporal framework.
METHODS: We reanalyzed publicly available single-nucleus RNA sequencing data from C57BL/6 J mouse cochleae at 3, 12, and 24 months and cross-validated against two independent bulk microarray cohorts. Ligand-receptor interactions were inferred and validated at the ligand-expression level. GRNs were reconstructed and perturbed in silico; and feature selection extracted cross-scale inflammatory features.
RESULTS: ARHL did not follow a linear decline. A cochlea-wide type I interferon response peaked at 12 months and resolved by 24. Apolipoprotein E followed a three-phase trajectory, baseline, compensatory upregulation, collapse, across spiral ganglion neurons, inner hair cells (IHCs), macrophages, and fibrocytes. SLIT-ROBO axon-guidance signaling shut down in these cells, alongside neurotrophic and Notch withdrawal. In silico perturbation identified T-box transcription factor 2 (Tbx2) as a protective GRN node: knockout drove 81.2% of IHCs toward aging and overexpression 74.6% toward youth. A 13-gene inflammatory panel showed midlife activation and end-stage exhaustion in macrophages, mirroring the interferon peak.
CONCLUSION: These findings support a two-stage ARHL model, midlife immune activation followed by end-stage synaptic, lipid, and axon-guidance collapse, positioning the midlife window and Tbx2-dependent IHC maintenance as candidate intervention targets, pending in vivo validation.